Marphy

Marphy.github.io

mypages

transferlearning

Everything about Transfer Learning and Domain Adaptation--迁移学习

MVGCN

Multi-View Graph Convolutional Network and Its Applications on Neuroimage Analysis for Parkinson's Disease (AMIA 2018)

pycortex

Pycortex is a python-based toolkit for surface visualization of fMRI data

machinelearning

My blogs and code for machine learning. http://cnblogs.com/pinard

dicomifier

Convert data from Bruker to DICOM and from DICOM to NIfTI

skbold

Utilities and tools for machine learning on BOLD-fMRI data

pydiq

Simple DICOM browser in Python (currently not maintained)

gcn

Implementation of Graph Convolutional Networks in TensorFlow

video-classification-3d-cnn-pytorch

Video classification tools using 3D ResNet

gc-mc

Optical-Flow-Guided-Feature

Implementation Code of the paper Optical Flow Guided Feature, CVPR 2018

cluster_roi

Python script to perform the spatially constrained parcellation of functional MRI data as described in Craddock et al., Human Brain Mapp., 33 (9) 2012

Dynamic-Graph-Metrics

geneExpression_Repository

Maps gene samples into surface parcellation

deepvariant

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

handson-ml

A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in python using Scikit-Learn and TensorFlow.

MALSAR

Multi-task learning via Structural Regularization

framework

Machine learning, computer vision, statistics and general scientific computing for .NET

wildcat.pytorch

PyTorch implementation of "WILDCAT: Weakly Supervised Learning of Deep ConvNets for Image Classification, Pointwise Localization and Segmentation", CVPR 2017

DIGITS

Deep Learning GPU Training System

resnet_cnn_mri_adni

Code for Residual and Plain Convolutional Neural Networks for 3D Brain MRI Classification paper

pyradiomics

Open-source python package for the extraction of Radiomics features from 2D and 3D images and binary masks.

deepmedic

Efficient Multi-Scale 3D Convolutional Neural Network for Brain Lesion Segmentation

ML_CLASS_AndewNg

斯坦福机器学习课程课后习题全解

CCS

Connectome Computation System

DSI-Studio

Diffusion MRI analysis tool

BEaST

C implementation of Brain Extraction based on nonlocal Segmentation Technique

mrtrix3

MRtrix provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), probabilistic tractography, track-density imaging, and apparent fibre density

caffe

Caffe: a fast open framework for deep learning.