MarcCote / tractconverter

Converter for different neuro-imaging file formats.

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What is the reason for reporting the following error when installing?

zlf123-marker opened this issue · comments

Collecting http://github.com/MarcCote/tractconverter/archive/master.zip
Cache entry deserialization failed, entry ignored
Downloading http://github.com/MarcCote/tractconverter/archive/master.zip
/ 81kB 206kB/s
Complete output from command python setup.py egg_info:
Downloading https://pypi.python.org/packages/source/d/distribute/distribute-0.6.14.tar.gz
Extracting in C:\Users\2019041\AppData\Local\Temp\tmpxvutj8tx
Traceback (most recent call last):
File "C:\Users\201904
1\AppData\Local\Temp\pip-y6k502c8-build\distribute_setup.py", line 143, in use_setuptools
raise ImportError
ImportError

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "<string>", line 1, in <module>
  File "C:\Users\201904~1\AppData\Local\Temp\pip-y6k502c8-build\setup.py", line 13, in <module>
    distribute_setup.use_setuptools()
  File "C:\Users\201904~1\AppData\Local\Temp\pip-y6k502c8-build\distribute_setup.py", line 145, in use_setuptools
    return _do_download(version, download_base, to_dir, download_delay)
  File "C:\Users\201904~1\AppData\Local\Temp\pip-y6k502c8-build\distribute_setup.py", line 125, in _do_download
    _build_egg(egg, tarball, to_dir)
  File "C:\Users\201904~1\AppData\Local\Temp\pip-y6k502c8-build\distribute_setup.py", line 99, in _build_egg
    _extractall(tar)
  File "C:\Users\201904~1\AppData\Local\Temp\pip-y6k502c8-build\distribute_setup.py", line 467, in _extractall
    self.chown(tarinfo, dirpath)
TypeError: chown() missing 1 required positional argument: 'numeric_owner'

----------------------------------------

Command "python setup.py egg_info" failed with error code 1 in C:\Users\201904~1\AppData\Local\Temp\pip-y6k502c8-build\

Which Python version are you using? TractConverter only supports Python 2.7.

Also, note that TractConverter has been deprecated in favor of Nibabel for a few years now.

Excuse me, besides this method, I would like to ask how to convert TRK files into VTK files?

Hi. I wouldn't use TractConverter to do the conversion. See the following for an example of how to covert TRK to VTK using Dipy
https://mail.python.org/pipermail/neuroimaging/2019-July/002006.html

Thank you so much