ManiVault Studio's repositories
Scatterplot
ManiVault plugin for rendering scatter plots
UMAP-Plugin
UMAP analysis plugin for ManiVault
ClusterIO
ManiVault plugins for saving/loading clusters data sets as/from binary files
HDF5Loader
Loader Plugin for HDF5 based formats such as 10X, TOME and H5AD
DimensionsViewerPlugin
Viewer for inspecting data dimensions
VolumeViewerPlugin
View plugin for volumetric image data
SpidrPlugin
Incorporate spatial information in dimensionality reduction methods for high-dimension images
ExtCsvLoader
Extended CSV Loader
github-actions
Github actions that can be reused in other hdps repos for CI or other purposes.
PointDataConversionPlugin
HDPS plugin for point data conversion
MeanShiftClustering
Analysis plug-in responsible for clustering points using the Mean Shift algorithm
CsvLoader
HDPS plugin for loading CSV data from file
ParallelCoordinatesPlugin
Parallel coordinates plugin for ManiVault
PcaPlugin
Principle Component Analysis plugin for ManiVault
t-SNE-Analysis
t-SNE and HSNE analysis plugin for ManiVault
ProjectionExplorer
Scatterplot view that provides additional explanatory visualizations for data projections.
BinIO
HDPS plugin for loading binary data from file
ImageLoaderPlugin
Image loader plugin for the ManiVault framework
ImageViewerPlugin
ManiVault plugin for viewing high dimensional image collections
JupyterPlugin
Provide a JupyterNotebook server to allow experimental data manipulation
ExamplePlugins
Contains examples of all possible plugin types
SpectralViewPlugin
View plugin for ManiVault for spectral data (e.g., ENVI).
DifferentialExpressionPlugin
Plugin for computing differential expression, supporting sparse data