Angela's repositories
SCENICprotocol
A scalable SCENIC workflow for single-cell gene regulatory network analysis
Assemblosis
CWL-based automated bioinformatics workflow for PacBio and Illumina data
CELLECT
CELLECT (CELL-type Expression-specific integration for Complex Traits)
CellPhoneDB.plots
CellPhoneDB figure plots
coder2gwy
互联网首份程序员考公指南，由3位已经进入体制内的前大厂程序员联合献上。
common-workflow-language
Repository for the CWL standards. Use https://cwl.discourse.group/ for support 😊
deepvariant
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
dynmethods
A collection of 50+ trajectory inference methods within a common interface 📥📤
excelerate-scRNAseq
Single RNA-seq data analysis with R (Finland, May, 2019)
ggpointdensity
:chart_with_upwards_trend: :bar_chart: Introduces geom_pointdensity(): A Cross Between a Scatter Plot and a 2D Density Plot.
GWA_tutorial
A comprehensive tutorial about GWAS and PRS
NGS-pipeline
By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline
SCP
SCP provides a comprehensive set of tools for single cell data processing and downstream analysis.
scRNAtoolVis
Useful functions to make your scRNA-seq plot more cool!
single-cell-tutorial
Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"
SingleCell
Code repository for single cell RNA-seq
STARTRAC
STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)
velodyn
Dynamical systems methods for RNA velocity analysis