Giters
MG-RAST

MG-RAST

Geek Repo

The MG-RAST metagenome portal

Location:Argonne Illinois

Home Page:https://www.mg-rast.org

Github PK Tool:Github PK Tool

MG-RAST's repositories

AWE

workflow and resource management system for bioinformatics data analysis

Language:GoLicense:BSD-2-ClauseStargazers:69Issues:10Issues:51

Shock

An object store for scientific data

Language:GoLicense:BSD-2-ClauseStargazers:51Issues:12Issues:32

MG-RAST

The MG-RAST Backend -- the API server

Language:PerlLicense:BSD-2-ClauseStargazers:44Issues:11Issues:12

MG-RAST-Tools

Repository of script tools, examples, and contributed code for using the MG-RAST API

Language:PythonLicense:BSD-2-ClauseStargazers:26Issues:14Issues:20

pipeline

The MG-RAST pipeline

Language:Common Workflow LanguageLicense:BSD-2-ClauseStargazers:24Issues:11Issues:3

DRISEE

duplicate read inferred sequencing error estimator

Language:PythonLicense:NOASSERTIONStargazers:9Issues:9Issues:1

MG-RASTv4

The MG-RAST frontend -- the JavaScript web site

Language:HTMLLicense:BSD-2-ClauseStargazers:8Issues:7Issues:8

Skyport2

framework for large scale data management and reproducible multi-cloud workflow execution

Language:PerlLicense:BSD-2-ClauseStargazers:5Issues:4Issues:5

MG-RAST-infrastructure

CoreOS/Fleet Infrastructure for MG-RAST

Language:ShellStargazers:3Issues:7Issues:0

myM5NR

M5NRv2 -- non-redundant protein and rRNA database integration

Language:PerlLicense:BSD-2-ClauseStargazers:3Issues:9Issues:2

Retina

JavaScript library used in MG-RAST and skycore

Language:JavaScriptLicense:BSD-2-ClauseStargazers:3Issues:7Issues:1

go-shock-client

go client library for Shock

Language:GoStargazers:2Issues:5Issues:0

golib

Language:GoLicense:BSD-2-ClauseStargazers:2Issues:7Issues:0

tech-report

MG-RAST manual and documentation

Language:TeXLicense:BSD-2-ClauseStargazers:2Issues:11Issues:0

amplicon

Language:Common Workflow LanguageStargazers:1Issues:7Issues:1

anl-seq-service

Language:ShellStargazers:1Issues:3Issues:3

autoskewer

Repository for wrapper scripts for adapter trimming of high throughput sequence data, mostly illumina.

Language:PythonLicense:BSD-2-ClauseStargazers:1Issues:2Issues:0

CWL-Tools

CWL Tool repository

Language:Common Workflow LanguageStargazers:1Issues:5Issues:0

ebi-submitter

Tools for submitting public MG-RAST jobs to the EBI's ENA archive

Language:PerlStargazers:1Issues:6Issues:0

DataManager

Language:PythonStargazers:0Issues:3Issues:0

API-testing

test script and data for MG-RAST API tests

Language:PythonStargazers:0Issues:6Issues:0

assembly-and-clustering

Assembly and clustering workflow

License:BSD-2-ClauseStargazers:0Issues:5Issues:0

authServer

oAuth authentication server with rights management

Language:PerlStargazers:0Issues:5Issues:1

awe-monitor

Monitor for the AWE server

Language:JavaScriptStargazers:0Issues:1Issues:0

go-rwmutex

go library of a read-write mutex

Language:GoStargazers:0Issues:3Issues:0

MG-RAST-exporter

Language:GoStargazers:0Issues:5Issues:0

qiime-pipeline

MG-RAST embedded QIIME pipeline using CWL

Language:Common Workflow LanguageLicense:GPL-3.0Stargazers:0Issues:6Issues:0

SequenceCenter

Sequencing Center Data Management App

Language:JavaScriptStargazers:0Issues:5Issues:0

skewer

Language:C++License:MITStargazers:0Issues:3Issues:0

Skyport2-Workflows-Tutorial

Language:ShellStargazers:0Issues:4Issues:0