bachelor thesis in the field of systems biology
Title: Implementation of a controller for cell cycle synchronization Author: Michael Dyck Institue for Systems Theory and Automatic Control, University of Stuttgart Supervisors: Karsten Kuritz and Dirke Imig Programming Language: Python
Files:
.gitignore file --> only required and adapted files of the pybrn package are committed
Folder Python_Files:
CellCycleSynchronization_Preliminarities.py --> contains code of the preliminary simulations necessary for determination of limit cycle trajectory and cell division condition
CellCycleSynchronization_Simulation.py --> actual simulation of cell population with code for calculation of input and simulation framework
Phase_Response_Curve_Z_v2010_startCb.dat --> contains data of the phase response curve (PRC) necessary for the calculation of the input for the stimulation