Mohsen's repositories
User-Notebooks
Notebooks for ePSIC users
Merlin-Medipix
Code for conversion and analysis of Merlin-Medipix data
ParticleSpy
Package for analysing particles in electron microscopy data sets.
microscope_control
A repository for scripts that allow control of the microscope.
DiffractionImageStitcher
A graphical app that stitches together microscope images and dynamically loads in each pixel's diffraction pattern when needed
WorkflowWorkbooks
Jupyter notebooks for running the stemsegement workflow on the cluster
Hyperspy_Workshop_2022
Notebooks used during the 2022 Hyperspy Workshop at ePSIC, Diamond Light Source.
My_Repository
Random codes for various personal stuff
Hyperspy_Workshop_2021
This repository contains the notebooks used for the 2021 Hyperspy Workshop at ePSIC, Diamond Light Source.
pyxem
pyXem (Pythonic Crystallographic Electron Microscopy) is an open-source Python library for crystallographic electron microscopy. Contact us: pyxem.team@gmail.com
hyperspy
Multidimensional data analysis
diffsims
diffsims is an open-source python library for simulating diffraction.
pyxem-demos
Tutorials and examples for pyXem (Pythonic Crystallographic Electron Microscopy), an open-source Python library for crystallographic electron microscopy. Contact us: pyxem.team@gmail.com
openNCEM
A collection of packages and tools for electron microscopy data analysis supported by the National Center for Electron Microscopy facility of the Molecular Foundry
trackpy
Python particle tracking toolkit