LooseLab's repositories
minotourapp
Minotour API, web and client code
read_until_api_v2
Python3 Read Until API implementation
minotour-docker
Test for minotour docker compose test
barcode_paper_nb
Companion repo for https://www.biorxiv.org/content/10.1101/2021.12.01.470722v1
read_until_api
Read Until client library for Nanopore Sequencing
ww_nf_minimal
A minimal NXF workflow for analysing consortium wastewater data
file_creation_simulator
Move fastq files from given dir to dir
flowcellvis
Animated GIF of flow cell performance from sequencing summary file.
Icarust_docker
A stand alone docker based setup for Icarust, the readfish simulation software.
Icarust_supplementary_data
Supplementary data for the corrsponding Icarust paper. See README.md for layout of files.
iterassemble
An iterative assembler for exploiting transcripts and whole genome reads from hard to assemble genomes.
ONT_ARTIC_Summaries
simple script to parse sequencing summary files to extract useful information and stats.
readfish-tools
Utility command line tools for helping run readfish
sturgeon
Sturgeon is a CNS neural network classifier