Zhe Liu (Liuzhe30)

Liuzhe30

Geek Repo

Company:Shanghai Jiao Tong University

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Zhe Liu's repositories

TMP-SS

A Secondary Structure along with Topology Structure Predictor for Alpha Transmembrane Proteins

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TMP-SSurface-2.0

A Deep Learning-Based Predictor for Surface Accessibility of Transmembrane Protein Residues

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space-hhblits

A sequence-based coding that combines the 3d structure and evolutionary conservation of proteins

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ASW-Net

ASW-Net: A Deep Learning-based Tool for Cell Nuclei Segmentation of Fluorescence Microscopy

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AttADR

A psychiatric ddi classfication tool using deep learning network.

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CHRP

Comprehensive Analysis of Peripheral Transcriptomic and Epigenomic Profiles for Predicting Clinical High-Risk Psychosis Transitions

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Emden

Predicting the effect of mutations on clinical drug response using graph representation and transformer encoders

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gait-profile

Gait profile recognition using VGG and LSTM

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SoloIMC

A Cell Instance Segmentation Tool using SOLOv2.

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MIPPI

Inferring the Effects of Protein Variants on Protein–protein Interactions with Interpretable Transformer Representations

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EMO

Predicting the effect direction of non-coding mutations on gene expression using deep learning

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ukb_anxiety_prs

Assessing the Polygenic Risk between Anxiety and Gut Microbiota Using Machine Learning

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awesome-semantic-segmentation

:metal: awesome-semantic-segmentation

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DrugsParser

Tools for parsing different drug databases

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flask_server

The main backend code for ICDtools server based on flask

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MEMO-stab

MEMO-stab: Sequence-based Annotation of Mutation Effect on Transmembrane Protein Stability with Protein Language Model-Driven Machine Learning

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modrugs

A full drugs.com scrapper

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Unet

Unet for image segmentation using Pytorch

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