Linhua Sun's repositories
Ath_Heat_Hi-C
Bioinformatic analysis of RNA-Seq, WGBS, and Hi-C in Arabidopsis
faang-methylation
This repo is to collect the FAANG methylation group's code and pipelines
TEanalysis
Analysis of TE contribution to features (transcripts or simple features). Includes utils to test enrichment.
formattable
Formattable Data Structures
Linhua-Sun.github.io
Webpage for Linhua Sun.
METACLUSTER
R package for context-specific functionality analysis of metabolic gene clusters
Population_Genetics
Start to Test Pop gen on BIG DATA
R-in-Centos-7
Use R!
rnaseq_tutorial
Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.
smcpp
SMC++ infers population history from whole-genome sequence data.
the-art-of-command-line
Master the command line, in one page