LinguaPhylo's repositories
linguaPhylo
LinguaPhylo: A language for describing, visualising and simulating probabilistic phylogenetic models
linguaPhylo.github.io
LinguaPhylo website including tutorials and posts.
LPhyBeastExt
The BEAST 2 package extended from the core project LPhyBeast
LPhyBeastTest
LPhyBeast + BEAST2 tests for tutorials
beast-outercore
The outercore package of BEAST 2
GradlePlugins
Define lphy extension conventions and share the build logic
HelloLPhy
The template to guide how to create a LPhy/LPhyBEAST extension
linguaPhyloDSL
An attempt to produce a compiler and interpreter for the LPhy language using Xtext
LinguaPhyloMPS
An attempt to write a LPhy language parser with IntelliJ MPS
LPhyRevPy
Convert LPhy models to RevBayes script
LPhyScripter
A GUI user interface for generating LPhy scripts without writing any LPhy code
supplementary
to keep the supplementary materials, especially large files
jebl3
Java Evolutionary Biology Library using the Java module system.
LPhyB2
The LPhy extension to import beast2 core