LennonLab / MinimalCell

MinimalCell

Data and code associated with this repository are associated with the following paper: Evolution of a minimal cell by Moger-Reischer RZ, Glass JI, Wise KS, Sun L, Bittencourt DMC, Lehmkuhl BK, Schoolmaster Jr DR, Lynch M, Lennon JT

On 20 May 2023, a Zenodo entry (doi 10.5281/zenodo.7953578) was created for this repository: https://doi.org/10.5281/zenodo.7953578

• Most of the data used for statistical analyses are contained in the datafiles folder. The exception to this are the data associated with growth curves, which can be found in scripts/5.GrowthCurves/data

• Within the script/5.GrowthCurve folder, there are four foldes. /test contains .Rmd files that run the Gompertz model using data in the data folder. In the bin folder, there are a number of files needed for running the Gompertz model. Parameters and other output can be found in the /output folder.

• All of the code for runnings statistics and making figures can be found in scripts

• Figures generated from data in this respository can be found in the figures folder, organied by section of the paper in which they appear