Jianjun Jin's repositories
GetOrganelle
Organelle Genome Assembly Toolkit (Chloroplast/Mitocondrial/ITS)
GetOrganelleDB
GetOrganelle Default Databases
GetOrganelleDep
GetOrganelle Dependencies
GetOrganelleGallery
Organelle Genome Assembly Gallery
ALLHiC
ALLHiC: phasing and scaffolding polyploid genomes based on Hi-C data
bioconda-recipes
Conda recipes for the bioconda channel.
bpp
Bayesian analysis of genomic sequence data under the multispecies coalescent model
coronavirus
🦠 Coronavirus Tracker
earthengine-py-notebooks
A collection of 300+ Jupyter Python notebook examples for using Google Earth Engine with interactive mapping
Easy353Test
Test data and results for Easy353.
GEKKO
GEKKO Python for Machine Learning and Dynamic Optimization
GetOrganelleComparison
Benchmark Test of Organelle Genome Assembly Using GetOrganelle
iFragariaTest
Test dataset
ipcoal
Simulation package for getting gene tree distributions and loci / SNPs from input tree topologies and migration / Ne scenarios. Wraps around msprime.
kmunity
A database and tool set for extracting and storing genome characteristics from published Illumina data
nCoV
2019-nCoV 武汉新冠状病毒肺炎疫情信息导航及实时数据接口
nCov2019
query stats of infected coronavirus cases
photogram
photogrammetry pipeline
phylogenetic-data-science
Phylogenetic Data Science Course
Rings
organelle genome assembly workshop
rnsii
Interface to the National Specimen Information Infrastructure(NSII)
toytree
A minimalist tree plotting library using toyplot graphs