KenLauLab

KenLauLab

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Location:Nashville, TN

Home Page:https://www.mc.vanderbilt.edu/vumcdept/cellbio/laulab/people.html

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KenLauLab's repositories

pCreode

An algorithm for mapping cell state transitions.

Language:Jupyter NotebookLicense:GPL-2.0Stargazers:25Issues:5Issues:15

dropkick

Automated cell filtering for single-cell RNA sequencing data

Language:PythonLicense:MITStargazers:24Issues:4Issues:6

DR-structure-preservation

A quantitative framework for evaluating data structure preservation by dimensionality reduction techniques

Language:PythonStargazers:13Issues:2Issues:0

NVR

NVR is a python implementation of gene feature selection used in Welch et al.,2016

Language:Jupyter NotebookLicense:GPL-2.0Stargazers:6Issues:3Issues:4

pCreode_Comparison_Across_Datasets

Method for comparing single-cell developmental trajectories across data sets.

Language:Jupyter NotebookLicense:MITStargazers:2Issues:2Issues:0

STAR_Protocol

A comprehensive, modular scRNA-seq pipeline designed from open-source tools.

Language:PythonLicense:MITStargazers:1Issues:1Issues:0
Language:HTMLStargazers:0Issues:3Issues:0

pCreode_trend_fits

Expression trend fits along p-Creode trajectories

Language:Jupyter NotebookStargazers:0Issues:0Issues:0
Language:Jupyter NotebookLicense:MITStargazers:0Issues:1Issues:0