Tom Kelly's repositories
Kelly-ST-HRI
Config files for my GitHub profile.
000
hicup-plus
Hi-C data processing pipeline (with Dragen and HiSAT2 aligners)
Language:PerlLGPL-3.0000
SpecHLA
SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events.
MIT000
HiC_tools
A collection of tools for Hi-C data analysis
MIT000
HiCBricks
HiCBricks offers user-friendly and efficient solutions for handling large high-resolution Hi-C datasets. The package provides a R/Bioconductor framework with the bricks to build more complex data analysis pipelines and algorithms.
NOASSERTION000
hic2cool
Lightweight converter between hic and cool contact matrices.
Language:PythonMIT000
Language:NextflowMIT000
universc
UniverSC: a flexible cross-platform single-cell data processing pipeline
GPL-3.0000