Tulay Karakulak's repositories
gtex-tcga-data-download
Describes how to download RNA-Seq controlled data from GTEx via sra-toolkit and from TCGA via GDC Data Transfer Tool
CanIsoNet_Web
Functional impact of cancer-specific isoform switching events: Visualization via STRING interaction network
ccRCC_scLongRead
This repository has the codes to reproduce the figures in our paper on single-cell long-read RNA sequencing data of patient-derived ccRCC organoids
CanIsoNet
Predicting pathogenic impact of isoform switches in 1209 cancer samples covering 27 cancer types using an isoform-specific interaction network
CodecademyProjects
This repository contains solution codes for codecademy projects
compbiozurich.github.io
A resource of the Zurich bioinformatics and computational biology community
Isoform_Comparison
Comparison of Isoform Switching Events in 3 PanCancer Studies
KarakulakTulay
Config files for my GitHub profile.
MDTToolset
R package to detect Most Dominant Transcripts and Their Switches
STA425DP_Exercises
This repository includes exercises of the course STA425DP - Fall semester 2020 - UZH