Kalan-Lab's repositories
DeLaCruz_Townsend_etal_PorcineSkinMicrobiome
Code for data analysis and figures for the manuscript "Discovering the Microbial Community and Antifungals within the Porcine Skin Microbiome" by K. De La Cruz and E.C. Townsend et al.
Salamzade_etal_CtuberCompGen
Code for Comparative Genomics + Metagenomic Investigation of the C. tuberculostearicum species complex
Salamzade_etal_zol
Misc. code & scripts associated with the zol & fai manuscript.
Spurgeon_Townsend_etal_MmuPV1_VaginalMicrobiome
Code for data analysis and figures for the manuscript "Key aspects of papillomavirus infection influence the host cervicovaginal microbiome in a preclinical murine papillomavirus (MmuPV1) infection model" by M.E. Spurgeon and E.C. Townsend et al.
Swaney_etal_CobamidePaper
Code for data analysis and visualization in Swaney et al. mSystems 2022
Swaney_etal_SkinMediaPaper
Code for data analysis and visualization in Swaney et al. Microbiology Spectrum 2023
Townsend_etal_WhatIsSlough
Code for data analysis and figures for the manuscript "What is Slough? Defining the proteomic and microbial composition of wound slough and its implications for wound healing" by E.C. Townsend et al.