Junyu Chen's repositories
16S-Taxa-Phlyo
Use 16S Sanger sequencing to identify the taxa of culturomics
Bacteriophage-helper
Bacteriophage standard operating procedure
BIOE504-Final-Project
BIOE504: Analytical Methods for Bioengineering Fall 2021 Final Project
Metagenomics-Pipeline
Metagenomics Pipeline
Obsidian2Flourish
Convert Obsidian graph view to Flourish online preview
Personal-Microbiome-Project
My Personal Microbiome Project
DataDownload
Fun with Aspera
examples
Microbiome Informatics - API and service usage examples
handson-ml2
A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in Python using Scikit-Learn, Keras and TensorFlow 2.
METIS
METIS: A versatile active learning workflow for optimization of genetic and metabolic networks
Obsidian-Homepage
A dashboard for your obsidian vault.
OuraRing
Code for collecting, analyzing and visualizing data from the Oura Ring
PCAS
PCAS: check the coverage of your primer pair before putting on amplicon sequencing
Primer-coverage-estimator
This can estimate the primer coverage of 16S&23S