IBG-1: Biotechnology

calibr8

Toolbox for non-linear calibration modeling.

robotools

Pythonic in-silico liquid handling and creation of Tecan FreedomEVO worklists.

bletl

Parsing and data analysis with BioLector microbioreactor data.

detl

Python package for processing of DASware raw data exports.

murefi

Package for multiple replicate fitting and Bayesian modeling.

diginbio-car-paper

Data and analysis for the DigInBio CAR application study

peak-performance

A Python toolbox for Bayesian inference of peak areas.

bletl-paper

Supporting information to the paper "bletl - Exploratory, at-line and automated data analysis of of microbioreactor data".

OT-2-autoclone

petase-ts-paper

Repository with data, code and plots for PETase secretion study with Thompson Sampling.

Supplement-to-Breuer-et-al.-2023a

Supplement-to-Helleckes-Kuesters-et-al.-2023

Repository with code for analysis of CatIBs with Bayesian process model and Thompson sampling

Supplement-to-Kasahara-et-al.-2023a

Supplement-to-Mitosch-et-al.-PLOS-2023

Supplement-to-Reiter-et-al.-2022a

This is the supplementary code for https://www.mdpi.com/2218-1989/12/3/257

Supplement-to-Schito-et-al.-CoNoS-MetabEng-2022

Supplement-to-Seiffarth-et-al.-ISBI-2024

Supplement-to-Steier-et-al.-2024

Supplement-to-Steinhoff-and-Finger-et-al.-2022

The Jülich contribution to "High precision ks-estimation" by Heiko Steinhoff et al.

Supplement-to-Theorell-et-al.-Metabolic_Engineering-2024

Supplement-to_Borah-et-al.-MSB-2023

calibr8-paper

Data and code to the paper "Bayesian calibration, process modeling and uncertainty quantification in biotechnology".

MooViE

Visualization tool for exploring multi variate data with an input - output semantic

Supplement-to-Reiter-et-al.-2023a