JoostJM

SlicerCaseIterator

Simple Scripted Module to batch process patients in 3D Slicer

remote_kernel

Pure-python package to start and connect to IPyKernels running on remote server via SSH

nrrdify

DICOM conversion script to check and sort DICOM slices prior to conversion using SimpleITK

torchsample

High-Level Training, Data Augmentation, and Utilities for Pytorch

nnUNet

pyradiomics

Open-source python package for the extraction of Radiomics features from 2D and 3D images and binary masks.

SSH.NET

SSH.NET is a Secure Shell (SSH) library for .NET, optimized for parallelism.

Attention-Gated-Networks

Use of Attention Gates in a Convolutional Neural Network / Medical Image Classification and Segmentation

cornerstone3D

Cornerstone is a set of JavaScript libraries that can be used to build web-based medical imaging applications. It provides a framework to build radiology applications such as the OHIF Viewer.

ExtensionsIndex

Slicer extensions index

fo-dicom

Fellow Oak DICOM for .NET, .NET Core, Universal Windows, Android, iOS, Mono and Unity

gatewaye

mifs

Parallelized Mutual Information based Feature Selection module.

lib_nrf24

Python library for NRF24L01+ Transceivers

MultiVolumeImporter

A 3D Slicer module for to support import of multi-volume data from non-DICOM sources, and provide plugin for importing such data from images saved in DICOM.

nrrdify_suv

Expansion to nrrdify, adding conversion to SUV values for PET Dicom

OrthancForward

Python Script to forward first slice of new DICOM series on an Orthanc server

pyradiomics_OLD

RF24

OSI Layer 2 driver for nRF24L01 on Arduino & Raspberry Pi/Linux Devices

Viewers

OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages