Jonathon Mifsud's repositories
BatchArtemisSRAMiner
batch virus discovery pipeline for the USYD HPC Artemis
tidytuesday
My TidyTuesday plots and code. See https://github.com/rfordatascience/tidytuesday
Transcriptome_mining_extends_the_host_range_of_the_Flaviviridae_to_non-bilaterians
Repository containing the sequences, alignments, and phylogenetic trees generated in "Transcriptome mining extends the host range of the Flaviviridae to non-bilaterians"
2020-09-21-intro-to-r-workshop
Introduction to R Workshop
A-novel-papillomavirus-in-a-New-Zealand-fur-seal-Arctocephalus-forsteri-with-oral-lesions
Repository containing the data associated with "A novel papillomavirus in a New Zealand fur seal (Arctocephalus forsteri) with oral lesions"
ena-fast-download
Download FASTQ files of reads from the European Nucleotide Archive (ENA)
Mapping-glycoprotein-structure-reveals-defining-events-in-the-evolution-of-the-Flaviviridae
(some) Code associated with "Mapping glycoprotein structure reveals defining events in the evolution of the Flaviviridae"
open-traits-network.github.io
Open Traits Network Registry and Website
phantom
A minimalist, responsive portfolio theme for Jekyll with Bootstrap
RIntroduction
Stuff for the R Beginners Workshop @ MQU, 27th of Feb
RVDB
A reference viral database (RVDB)
JonathonMifsud.github.io
My personal academic website