Zhengyuan Xue's starred repositories
Intro-to-rnaseq-hpc-O2
This repository has teaching materials for a 2 and 3-day Introduction to RNA-sequencing data analysis workshop using the O2 Cluster
ESM-GearNet
ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)
GWA_tutorial
A comprehensive tutorial about GWAS and PRS
ViT-pytorch
Pytorch reimplementation of the Vision Transformer (An Image is Worth 16x16 Words: Transformers for Image Recognition at Scale)
PEER_Benchmark
PEER Benchmark, appear at NeurIPS 2022 Dataset and Benchmark Track (https://arxiv.org/abs/2206.02096)
pytorch-tutorial
PyTorch Tutorial for Deep Learning Researchers
tuning_playbook
A playbook for systematically maximizing the performance of deep learning models.
paper-reading
深度学习经典、新论文逐段精读
attention-is-all-you-need-pytorch
A PyTorch implementation of the Transformer model in "Attention is All You Need".
deepmind-research
This repository contains implementations and illustrative code to accompany DeepMind publications
Machine-learning-for-proteins
Listing of papers about machine learning for proteins.
awesome-machine-learning
A curated list of awesome Machine Learning frameworks, libraries and software.
deepcontact
DeepContact Software
EVcouplings
Evolutionary couplings from protein and RNA sequence alignments
d2l-pytorch
This project reproduces the book Dive Into Deep Learning (https://d2l.ai/), adapting the code from MXNet into PyTorch.
Python-100-Days
Python - 100天从新手到大师
Data-Analysis
Data Science Using Python