JhuangLab

JhuangLab

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Biomedical data analysis tools developed in Jinyan Huang Bioinformatics Lab.

Location:Shanghai, China

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JhuangLab's repositories

BioInstaller

A comprehensive R package to construct interactive and reproducible biological data analysis applications based on the R platform

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CytoTree

A Toolkit for Construct Tree-shaped Trajectory for Flow and Mass Cytometry data

ngstk

A toolkit developed by JhuangLab members to facilitate the analysis of next-generation sequencing (NGS) data.

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iseq

An integrated analysis toolkit and pipeline for Next-Generation Sequencing (NGS) panel sequencing data

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EWASpaper

Leveraging biological and statistical covariates improves the detection power in epigenome-wide association testing

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BioInstaller-docker-repo

Docker image repo

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CytoTree-dataset

Datasets and code for CytoTree

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flowSpy-dataset

Dataset of flowSpy

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GSEA-MSigDB

GSEA-MSigDB

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hyperion

A Toolkit for Imaging Mass Cytometry™ (IMC™) with the Hyperion™ Imaging System Data

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IMCpaper

Scripts for IMCpaper

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qap

quasispecies analysis package

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imctoolkits

A Toolkit for Imaging Mass Cytometry™ (IMC™) with the Hyperion™ Imaging System Data

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