Jonathan Augustin's repositories
scVisualizeR
Accessory package for visualizing gene expression in scRNA-seq data
jaugust7.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
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Kabuki-Syndrome-scRNA-analysis
scRNA-seq data analysis for the paper 'Transcriptional suppression from KMT2D loss disrupts cell cycle and hypoxic responses in neurodevelopmental models of Kabuki syndrome'
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lncRNA-Cell-Type-Specificity
Analysis of Linnarsson Data for lncRNA specificity paper.
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manuscript-templates
LaTeX templates for manuscripts. bioRxiv preprint and journal submission templates. For use on Overleaf.
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pantr2_mechanism_manuscript
Analysis associated with Pantr2 manuscript
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qPCR-Analysis-Rscript
a simple command line tool for qPCR analysis
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sci-RNA-seq3_pipeline
Processing pipeline scripts for sci-RNA-seq3 (bash, R, python)
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sciSeq_3T3-293T_pipeline
Preliminary pipeline for preprocessing sciSeq data.
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thesis-tables
tables for my thesis
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