JRaviLab's repositories
connectivity_scores
Review on 'Reconciling Multiple Connectivity Scores for Drug Repurposing.'
2023-glbio
MolEvolvR BTS: When and how to build a web-app and software package? | companion repository for the half-day workshop at GLBIO 2023
cheatsheets
Compilation of R, Unix, Vi, Git, MD cheatsheets & more!
jravilab.github.io
Janani Ravi's Research Group
dcia_evolution
Data and analysis for the DciA evolution manuscript | StallingsLab & JRaviLab
inlp_listeria
Companion repository to the Internalin P Listeria manuscript | HardyLab & JRaviLab
meetup-presentations
R-Ladies East Lansing meetup presentations, resources, photos & such!
phage_defense_avcd
Companion repo to the paper titled: 'A broadly conserved deoxycytidine deaminase protects bacteria from phage infection,' by Severin*, Hsueh*, et al., 2021.
R_intro
Introducing non-coders to R
start-bycc
Modeling the START transition in the budding yeast cell cycle
2023-mlhd
Companion repo to Microbial genomics & ML workshop @MLHD2023
bacteria-archaea-traits
A synthesis of bacterial and archaeal phenotypic trait data | forked from bacteria-archaea-traits | Madin 2020
Expresto
Data, results, and code accompanying the manuscript: "A Flexible, Interpretable, and Accurate Approach for Imputing the Expression of Unmeasured Genes" "
MolEvolvR
An R Package for characterizing proteins using molecular evolution and phylogeny
molevolvr2.0
WIP new molevolvr app
readingpapers
A guide to reading scientific papers
wall-of-software
A list of tools, packages, workflows, resources, and other software developed at or in collaboration with DBMI
workshop-shell-git
Files for git and shell workshop