JRaviLab

JRaviLab

Geek Repo

We develop computational approaches to study microbial genotypes, phenotypes, and diseases. PI: @jananiravi

Location:United States of America

Home Page:https://jravilab.github.io

Twitter:@JRaviLab

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JRaviLab's repositories

connectivity_scores

Review on 'Reconciling Multiple Connectivity Scores for Drug Repurposing.'

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iprscanr

R package for accessing InterProScan5 API

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2023-glbio

MolEvolvR BTS: When and how to build a web-app and software package? | companion repository for the half-day workshop at GLBIO 2023

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cheatsheets

Compilation of R, Unix, Vi, Git, MD cheatsheets & more!

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jravilab.github.io

Janani Ravi's Research Group

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dcia_evolution

Data and analysis for the DciA evolution manuscript | StallingsLab & JRaviLab

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inlp_listeria

Companion repository to the Internalin P Listeria manuscript | HardyLab & JRaviLab

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lab_docs

Documents related to Lab setup, onboarding, offboarding, resources, and such...

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meetup-presentations

R-Ladies East Lansing meetup presentations, resources, photos & such!

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phage_defense_avcd

Companion repo to the paper titled: 'A broadly conserved deoxycytidine deaminase protects bacteria from phage infection,' by Severin*, Hsueh*, et al., 2021.

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R_intro

Introducing non-coders to R

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rpackages

R package development - the Leek group way!

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start-bycc

Modeling the START transition in the budding yeast cell cycle

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2023-mlhd

Companion repo to Microbial genomics & ML workshop @MLHD2023

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bacteria-archaea-traits

A synthesis of bacterial and archaeal phenotypic trait data | forked from bacteria-archaea-traits | Madin 2020

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Expresto

Data, results, and code accompanying the manuscript: "A Flexible, Interpretable, and Accurate Approach for Imputing the Expression of Unmeasured Genes" "

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molevolvr2.0

WIP new molevolvr app

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readingpapers

A guide to reading scientific papers

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wall-of-software

A list of tools, packages, workflows, resources, and other software developed at or in collaboration with DBMI

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workshop-shell-git

Files for git and shell workshop

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