Jennifer Holmes's repositories
biopython
Official git repository for Biopython (originally converted from CVS)
beekeeper-studio
Modern and easy to use SQL client for MySQL, Postgres, SQLite, SQL Server, and more. Linux, MacOS, and Windows.
covid19-forecast-hub
Projections of COVID-19, in standardized format
docker
Docker - the open-source application container engine
matplotlib
matplotlib: plotting with Python
mssql-docker
Official Microsoft repository for SQL Server in Docker resources
notepad-plus-plus
Notepad++ official repository
pgbouncer
lightweight connection pooler for PostgreSQL
phoenix
🔥🐦🔥PHoeNIx: A short-read pipeline for healthcare-associated and antimicrobial resistant pathogens
plotly.py
The interactive graphing library for Python :sparkles: This project now includes Plotly Express!
postgres-1
Docker Official Image packaging for Postgres
public_health_bioinformatics
Bioinformatics workflows for genomic characterization, submission preparation, and genomic epidemiology of pathogens of public health concern.
pybedtools
Python wrapper -- and more -- for BEDTools (bioinformatics tools for "genome arithmetic")
python-prompt-toolkit
Library for building powerful interactive command line applications in Python
snakemake
This is the development home of the workflow management system Snakemake. For general information, see
sql-server-samples
Azure Data SQL Samples - Official Microsoft GitHub Repository containing code samples for SQL Server, Azure SQL, Azure Synapse, and Azure SQL Edge
transformers
🤗 Transformers: State-of-the-art Machine Learning for Pytorch, TensorFlow, and JAX.
Virtualization-Documentation
Place to store our documentation, code samples, etc for public consumption.
vscode
Visual Studio Code
vscode-mssql
Visual Studio Code SQL Server extension.