John Barsotti's repositories
alibi
Algorithms for explaining machine learning models
awesome-ggplot2
A curated list of awesome ggplot2 tutorials, packages etc.
autoEDA-resources
A list of software and papers related to automatic and fast Exploratory Data Analysis
contextualized-topic-models
A python package to run contextualized topic modeling. CTMs combine contextualized embeddings (e.g., BERT) with topic models to get coherent topics. Published at EACL and ACL 2021.
datawizard
Magic potions to clean and transform your data 🧙
dCVnet
an R package for prediction modelling - extending glmnet with double cross-validation
DeepCor
fMRI denoising based on deep learning
DiCE
Generate Diverse Counterfactual Explanations for any machine learning model.
FastSurfer
PyTorch implementation of FastSurferCNN
ggseg
Plotting tool for brain atlases, in ggplot
insight
:crystal_ball: Easy access to model information for various model objects
julearn
Forschungszentrum Jülich Machine Learning Library
marginaleffects
R package to compute and plot predictions, slopes, marginal means, and comparisons (contrasts, risk ratios, odds, etc.) for over 80 classes of statistical models. Conduct linear and non-linear hypothesis tests, or equivalence tests. Calculate uncertainty estimates using the delta method, bootstrapping, or simulation-based inference.
medspacy
Library for clinical NLP with spaCy.
modelsummary
Beautiful and customizable model summaries in R.
ploomber
The fastest ⚡️ way to build data pipelines. Develop iteratively, deploy anywhere. ☁️
PtitPrince
python version of raincloud
pycox
Survival analysis with PyTorch
pygwalker
PyGWalker: Turn your pandas dataframe into a Tableau-style User Interface for visual analysis
report
:scroll: :tada: Automated reporting of objects in R
scikit-llm
Seamlessly integrate LLMs into scikit-learn.
scispacy
A full spaCy pipeline and models for scientific/biomedical documents.
sentence-transformers
Multilingual Sentence & Image Embeddings with BERT
sklearn-deap
Use evolutionary algorithms instead of gridsearch in scikit-learn
tidycmprsk
:exclamation: This is a read-only mirror of the CRAN R package repository. tidycmprsk — Competing Risks Estimation. Homepage: https://mskcc-epi-bio.github.io/tidycmprsk/, https://github.com/MSKCC-Epi-Bio/tidycmprsk Report bugs for this package: https://github.com/MSKCC-Epi-Bio/tidycmprsk/issues