Illumina / BeadArrayFiles

Python library to parse file formats related to Illumina bead arrays

Illumina/BeadArrayFiles Issues

Exception: Data block version in cluster file 7 not supported
Closed a year ago3
LocusAggregate.aggregate_samples only populates first LocusAggregate
Closed 2 years ago2
Error: Exception: GTC file is incomplete
Updated 2 years ago3
GTC file version 3 can't output B allele frequencies and logr
Updated 2 years ago8
gtc to plink ped format - 0|G instead of A|G
Updated 2 years ago1
Obtaining GC and GT scores as columns in gtc_final_report.py
Updated 2 years ago1
Error from a call to a function from IlluminaBeadArrayFiles
Updated 3 years ago7
Error on calling TOP_strand genotypes
Closed 3 years ago2
Gentrain score in ClusterFile.py
Updated 3 years ago1
Need further clarifications on the return values of GenotypeCalls.py module
Updated 4 years ago3
Add unit tests
Updated 4 years ago
Toggle to remove loci that have been zeroed out in cluster file from DNA summary report
Updated 4 years ago
File specification for cluster files
Updated 5 years ago
Small difference observed in the normalized X and Y signals between GenomeStudio vs Illumina:BeadArrayFiles
Closed 5 years ago5
Illumina strand from manifest
Updated 5 years ago2
gtc_final_report.py
Closed 7 years ago7
Determining log r ratio and b allele frequency
Closed 7 years ago1
Weird Basecall result
Closed 7 years ago1