IMC Bioinformatics's repositories
dada2_16S_workflow
Amplicon sequencing workflow with snakemake and dada2
DAAMS
Differential abundance analysis for shotgun metagenomics
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Intermediate_Rworkshop2020
Intermediate R workshop
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metagenomics_guidlines
Helpful tips for designing metagenomics experiments
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microbiomeworkshop
16s microbiome analysis workshop
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Rbootcamp2018
Website for R workshop
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cytofkit
cytofkit: an integrated flow/mass cytometry data analysis pipeline
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cytoMine
CytoMine is a pipeline to analyze mass cytometry data
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metatranscriptomics
Our GitHub Metatranscriptomics Repository offers tools for analyzing RNA transcripts in microbial communities, revealing their active roles in different environments.
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omnibus-and-maaslin2-rscripts-and-hmp2-data
Omnibus and Maaslin2 Rscripts and hmp2-data
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