Giters
Innovation Center for Biomedical Informatics (ICBI) at Georgetown University (ICBI)

Innovation Center for Biomedical Informatics (ICBI) at Georgetown University

ICBI

Geek Repo

ICBI at Georgetown University Medical Center is an academic hub for cutting-edge research in biomedical informatics. Connect with us @ICBI_Georgetown

Location:Washington, DC

Home Page:http://icbi.georgetown.edu/

Twitter:@ICBI_Georgetown

Github PK Tool:Github PK Tool

Innovation Center for Biomedical Informatics (ICBI) at Georgetown University's repositories

viGEN

viGEN - A bioinformatics pipeline for the exploration of viral RNA in human NGS data

Language:ShellStargazers:26Issues:14Issues:6

neoantigeR

a R package to identify neoantigens from NGS data

Language:RStargazers:19Issues:12Issues:1

gdoc

G-DOC Web Application

Language:GroovyStargazers:4Issues:10Issues:0

Open-Science-Projects

Open Science Projects at Georgetown-ICBI

License:GPL-3.0Stargazers:4Issues:9Issues:0

medturk

medTurk (inspired by Amazon's Mechanical Turk) supports clinical research by using the ingenuity of humans to convert unstructured clinical notes into structured data.

Language:JavaScriptLicense:GPL-3.0Stargazers:3Issues:9Issues:0

BISR_Resource

Tutorials and training material from Georgetown University Biomedical Informatics Shared Resources (BISR)

Language:Jupyter NotebookStargazers:2Issues:8Issues:0

CINdex

CINdex Bioconductor package. Read more here: https://www.bioconductor.org/packages/release/bioc/html/CINdex.html

Language:RStargazers:1Issues:9Issues:0

MetPlus-DB

Stargazers:1Issues:20Issues:0

rembrandt-mri

Code used for the REMBRANDT MRI paper

Language:PythonStargazers:1Issues:7Issues:0

sevenbridgesworkflows

Genomics pipelines in JSON format

Stargazers:1Issues:10Issues:0

SIGH

Significant Intratumor Genomic Heterogeneity

Stargazers:1Issues:8Issues:0

.github

Welcome to Georgetown University Innovation Center for Biomedical Informatics !

Stargazers:0Issues:8Issues:0

AIMAHEAD_GU

AIM AHEAD at Georgetown University

Language:Jupyter NotebookStargazers:0Issues:8Issues:0

AIMAHEAD_GU_publicCourseData

Public repository containing public materials for associated online courses

Stargazers:0Issues:8Issues:0

AISAIC

Accurate Identification of Significant Aberrations in Cancer Genome (AISAIC)

Stargazers:0Issues:8Issues:0

Data.Bridge.Notebooks

AIM AHEAD Data Bridge Notebooks

Language:Jupyter NotebookStargazers:0Issues:7Issues:0

grails-gcore

G-CORE Project

Language:JavaScriptLicense:NOASSERTIONStargazers:0Issues:10Issues:0

Supporting-Files-For-Grants

Supporting Files For Grants

Stargazers:0Issues:3Issues:0

analysis-server

Analysis server

Language:JavaStargazers:0Issues:6Issues:0

ICBI_multi_omics_processing_public

Describes our multi omics analysis workflow

Language:CSSStargazers:0Issues:15Issues:0

MACE2K

MACE2K project members develop new computational methods and software to retrieve genes, disease, variant, drug related information from multiple sources of big data including: clinicaltrials.gov, PubMed abstracts, open access articles, and conference proceedings. The software suite primarily contains natural language processing features, machine learning tools and a data visualization module to view and edit relationships between entities extracted. This suite supports biocurators in their workflow to capture the best available evidence for Precision Medicine from unstructured text.

Language:JavaScriptStargazers:0Issues:11Issues:0

OPRMA

Online Platform for RNA Modification Analysis (OPRMA) for CLIP-seq data analysis

Stargazers:0Issues:10Issues:0