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Huising-Lab / epiRomics

An R package designed to integrate and visualize various levels of epigenomic information, including but not limited to: ChIP, Histone, ATAC, and RNA sequencing. epiRomics is also designed to identify enhancer and enhanceosome regions from these data.

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H3K4me1 and H3K27ac confirmation against FANTOM database function

ammawla opened this issue · comments

commented

Function to test different combinations of histone marks and co-occurence with FANTOM database enhancer calls, to evaluate and possibly determine best markers that delineate enhancer regions for our data. Results could possibly be very data driven.

commented

Function epiRomics_enhancer_predictor_test (development branch) resolves this issue.