Homère J. Alves Monteiro's repositories
acclimabest
Acclimatation du bénitier et ses symbiontes à la température - Labex Corail
getting-started-with-genomics-tools-and-resources
Unix, R and python tools for genomics and data science
2bRAD_denovo
Genome-wide de novo genotyping with 2bRAD
Acropora_gene_expression_meta
Meta-analysis of RNA-seq studies done in Genus Acropora
annotatingTranscriptomes
Assembly and annotation of transcriptomes de novo
Bioinformatic_Pipelines
Materials for the course "Bioinformatic Pipelines for Population Genomic data analysis"
Copenhagen-Popgen-Course_tyler
Teaching materials for Copenhagen course in high throughput sequencing data for population genetics
data_to_viz
Leading to the dataviz you need
EUostrea
Low-cov WGS genetic analysis of European Native oysters wild populations (Ostrea edulis).
FeralPigeonGenomics
🕊 This repository is associated with the manuscript Pacheco et al. (2022).
freebayes
Bayesian haplotype-based genetic polymorphism discovery and genotyping.
g-pacheco.github.io
🌐 This repository supports my webpage.
ms_oyster_popgen
Analysis of the Moore oyster project, Population Genomics
MyWebpage
🌐 This repository supports my webpage.
PERSIST
Codes and datasets used in the LabEx CORAIL Project PERSIST (2017).
physalia-lcwgs
Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 19-22 2020
PigeonBreedsGenomics
🕊 This repository is associated with the manuscript Pacheco et al. (2020).
RSEM
RSEM: accurate quantification of gene and isoform expression from RNA-Seq data
utility_scripts
Scripts for population genetics analysis