HenrikBengtsson / future.BatchJobs

:rocket: R package: future.BatchJobs: A Future API for Parallel and Distributed Processing using BatchJobs [Intentionally archived on CRAN on 2021-01-08]

https://cran.r-project.org/package=future.BatchJobs

HenrikBengtsson/future.BatchJobs Issues

Deprecation of future.BatchJobs package
Closed 4 years ago
CLEANUP: Drop S3 method await()
Closed 4 years ago
CHECKS: Remove folder .future/ created by R CMD check
Closed 5 years ago
Should 'workers = <character>' be allowed?
Closed 6 years ago
BUG: Argument 'workers' cannot be a function
Closed 6 years ago
CLEANUP: Deprecate and defunct
Closed 7 years ago
TESTS: Remove test with future::plan(lazy), which is deprecated and will be defunct soon
Closed 7 years ago1
Is support for BatchTools planned?
Closed 8 years ago4
batchjobs_*(): Add argument `workers` to specify number of workers
Closed 8 years ago1
Error with developers version of BatchJobs (> 1.6)
Closed 8 years ago
job.delay supported on torque cluster?
Closed 8 years ago2
Option to turn on the progress bar?
Closed 8 years ago4
Accept also labels that are not compatible with BatchJobs IDs
Closed 8 years ago1
BatchJobs sometimes returns Error syncing registry... database is locked
Closed 8 years ago8
BatchJobs hiccups that we may be able to work around
Updated 8 years ago4
No way to pass resources parameter to SLURM?
Closed 8 years ago9
VIGNETTE: Mention tweak() using an example
Closed 8 years ago
SPEED: Polling intervals should be reset when job is launched
Updated 8 years ago
Make it possible to pass `...` of batchjobs_by_template() to the template environment
Closed 8 years ago1
Future Resources: Make number of tasks a first-class citizen
Closed 8 years ago4
Implement separate batchjobs future constructors
Closed 8 years ago1
TEST: Test for `backend="multicore"` future gives error on OS X (R 3.2.3)
Closed 8 years ago2
FOR THE RECORD: When TORQUE/PBS kills a job using too much memory it causes a BatchJobs "expiration" error
Closed 8 years ago
Report also on job output for BatchJobFutureError:s
Closed 8 years ago3
TROUBLESHOOTING: Keep job registry files to simplify troubleshooting
Closed 8 years ago1
TROUBLESHOOTING: More informative error message than "fatal error occured: 101. qsub produced exit code 27; output qsub: submit error ..."
Updated 8 years ago
CLEANUP: Rename package to future.BatchJobs
Closed 8 years ago
BUG: Exported globals are overridden by base and BatchJobs objects
Closed 8 years ago3
Add argument `resources` for BatchJobsAsyncTask
Closed 9 years ago3
Make BatchJobsFuture self contained, i.e. move away from asyncBatchEvalQ()
Closed 8 years ago
Update asyncBatchEvalQ() to handle globals just like future package
Closed 8 years ago2
CLEANUP: Rename BatchJobsAsyncTask to BatchJobsFuture
Closed 8 years ago
backend() needs to called explicitly to override the default setup when package is loaded
Closed 8 years ago1
Add class attibute to batchjobs()
Closed 9 years ago
Update debug option `async::debug` to `future.debug`
Closed 9 years ago
Separate .async/ subdirectory for each R session
Closed 9 years ago3
WORKAROUND: Encode variable names before exporting to BatchJobs
Closed 9 years ago1
LIMITATIONS: It is not possible to export globals starting with a period
Closed 9 years ago1
LIMITATION: It is not possible to export operators, replacement functions etc.
Closed 9 years ago1
Update batchjobs() to handle `...` the same way lazy() does it
Closed 9 years ago
%plan% batchjobs(backend=...) does not undo the backend - should it?
Closed 9 years ago
Add multicore future based on the 'parallel' package
Closed 9 years ago2
Rename this package to BatchJobsFuture?
Closed 9 years ago1
Debugging: Record BatchJobs cluster functions in task object
Closed 9 years ago
CLEANUP: Turn BatchJobsAsyncTask() into a simple constructor
Closed 9 years ago
CLEANUP: Drop asyncEvalQ()
Closed 9 years ago
CLEANUP: Drop async() - use batchjobs() instead
Closed 9 years ago
CLEANUP: Drop makeClusterFunctionsRscript()
Closed 9 years ago
CLEANUP: Drop delayedAssign() operator %<-%
Closed 9 years ago
Add argument 'backend' to tempRegistry()
Closed 9 years ago