Henning Timm's repositories
bioconda-recipes
Conda recipes for the bioconda channel.
dataverse-ansible
Ansible role for installing Dataverse
dataverse
Open source research data repository software
snakemake
This is the development home of the workflow management system Snakemake. For general information, see
ansible-lint
Best practices checker for Ansible
PapasKiss
Listen to that Symphony
elabftw
:notebook: eLabFTW is the most popular open source electronic lab notebook for research labs.
das-versprechen-der-vernetzung
Daten und Dokumenten zu einem Netzwerkworkshop
elabapy
Python package to interact with eLabFTW's API
Documents
documents and screeshots for the wiki
pyvis
Python package for creating and visualizing interactive network graphs.
papis
Powerful and highly extensible command-line based document and bibliography manager.
segment_length_evaluation
This repository contains the evalutation workflow used for the Segment Length Distribution chapter of my PhD Thesis.
rad-seq-stacks_evaluation
Collection of evaluation workflows for the rad-seq-stacks snakemake pipeline.
rust-tab-hash
Implementation of simple and twisted tabulation hashing for rust.
bpht_evaluation_workflow
Evaluation workflow for Bitpacked Hopscotch Hashtable.
css-examples
Code examples that accompany the MDN CSS documentation
rdmo-docs-en
English documentation for rdmo
rdmo-plugins
Plugins for RDMO.
rust-bio-logo
Logo proposal for rust-bio
B2SAFE-core
B2SAFE service core code for EUDAT project
B2HANDLE
B2Handle Python library for interaction with Handle services
rna-seq-kallisto-sleuth
A workflow for RNA-seq differential expression analysis based on Kallisto and Sleuth.
minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences
tufte-latex
A Tufte-inspired LaTeX class for producing handouts, papers, and books