Hemaxi Narotamo's repositories
DL_ECG_Classification
Official implementation of the paper: "Deep learning for ECG classification: A comparative study of 1D and 2D representations and multimodal fusion approaches"
InterphaseCellCycleStaging
Official implementation of the paper: "Narotamo, H., Fernandes, M. S., Moreira, A. M., Melo, S., Seruca, R., Silveira, M., & Sanches, J. M. (2021). A machine learning approach for single cell interphase cell cycle staging. Scientific reports."
ClearMap2
ClearMap 2.0 with WobblyStitcher, TubeMap and CellMap
Butterfly_CNN
CNN’s for detection and measurement of butterfly eyespot patterns
conv_index_iris_filter
Implementation of the iris filter to obtain the gradient convergence maps of nuclei in microscopy images. Developed for the paper: "Narotamo, H., Sanches, J. M., & Silveira, M. (2020, July). Combining deep learning with handcrafted features for cell nuclei segmentation."
EC_analysis
Code for the study "Eph-ephrin signaling couples endothelial cell sorting and arterial specification" by Stewen J, Kruse K, Godoi-Filip AT, Jeong H, Adams S, Berkenfeld F, Stehling M, Red-Horse K, Adams RH, Pitulescu ME
Mask_RCNN
Mask R-CNN for object detection and instance segmentation on Keras and TensorFlow
Polarity-Vectors
A Deep-Learning Approach for Vectors Prediction in 3D Microscopy Images
SciTSR
Table structure recognition dataset of the paper: Complicated Table Structure Recognition
stardist
StarDist - Object Detection with Star-convex Shapes