Hasi Hays (PhD)'s repositories
awesome-pinescript
A Comprehensive Collection of Everything Related to Tradingview Pine Script.
awesome-systematic-trading
A curated list of awesome libraries, packages, strategies, books, blogs, tutorials for systematic trading.
BayesSpace
Bayesian model for clustering and enhancing the resolution of spatial gene expression experiments.
Binance-Futures-Trading-Bot
A Technical Analysis Bot that trades leveraged USDT futures markets on Binance.
biocypher
A unifying framework for biomedical research knowledge graphs
bulkDGD
Code, documentation, and tutorial for the DGD model trained on bulk RNA-Seq data.
CollecTRI
Gene regulatory network containing signed transcription factor-target gene interactions
corneto
CORNETO: A Unified Omics-Driven Framework for Network Inference
decoupler-py
Python package to perform enrichment analysis from omics data.
DiffDock
Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking
gmxtools
tools for GROMACS
gnina
A deep learning framework for molecular docking
gromacs
Public/backup repository of the GROMACS molecular simulation toolkit. Please do not mine the metadata blindly; we use https://gitlab.com/gromacs/gromacs for code review and issue tracking.
GromacsWrapper
GromacsWrapper wraps system calls to GROMACS tools into thin Python classes (GROMACS 4.6.5 - 2024 supported).
Intro-to-rnaseq-hpc-salmon-flipped
Introduction to bulk RNA-seq
lumibot
Backtesting and Trading Bots Made Easy for Crypto, Stocks, Options, Futures, FOREX and more
mistyR
Multiview Intercellular SpaTial modeling framework
nichenetr
NicheNet: predict active ligand-target links between interacting cells
omicverse
A python library for multi omics included bulk and single cell RNA-seq analysis.
omnipath
Python client for the OmniPath web service
OmnipathR
R client for the OmniPath web service
pypath
Python module for prior knowledge integration. Builds databases of signaling pathways, enzyme-substrate interactions, complexes, annotations and intercellular communication roles.
rapids_singlecell
Rapids_singlecell: A GPU-accelerated tool for scRNA analysis. Offers seamless scverse compatibility for efficient single-cell data processing and analysis.
rnaseq_workflow
snakemake workflow for bulk RNA-seq workflow using STAR-edgeR
SingleCellExperiment
Clone of the Bioconductor repository for the SingleCellExperiment package, see https://bioconductor.org/packages/devel/bioc/html/SingleCellExperiment.html for the official development version.
squidpy
Spatial Single Cell Analysis in Python
tradingview
Market Profile and Footprint scripts (indicators) for TradingView.
vnpy
基于Python的开源量化交易平台开发框架