Hakai Institute

kelp-o-matic

Segmentation Tools for Remotely Sensed RPAS Imagery

EOS-EXIF-Join

Join EOS and EXIF data files for image processing

hakai-bottle-tool

Python tool use to combine Hakai sample data and CTD data together and output in a NetCDF format to handle by ERDDAP

hakai-ml-train

Aerial image semantic segmentation for kelp, mussels, and others using PyTorch

hakai-oceanography-qc-tools

Hakai data viewer and quality control tool.

Beaked-Hazelnut-population-genetics

erddap-deploy

Run a series of tests on the different ERDDAP components to make sure a deployment will deploy sucessfuly.

False-Creek-Bioblitz-2022

hakai-datasets

Hakai Datasets that are going into https://catalogue.hakai.org/erddap/

hakai-profile-qaqc

Series of tests applied to the Hakai CTD profile data based on the QARTOD tests and other Hakai Specific ones.

ssta_images

upptime-trial

A templated repo of Upptime to test usefulness for Hakai.org and Hakaimagazine.com

cioos-siooc-schema

ckan schema definition for use with the ckanext-scheming extention

ckan

CKAN is an open-source DMS (data management system) for powering data hubs and data portals. CKAN makes it easy to publish, share and use data. It powers datahub.io, catalog.data.gov and europeandataportal.eu/data/en/dataset among many other sites.

ckanext-cioos_harvest

cioos-siooc extension to customize the behaviour of the spatial harvester

ckanext-cioos_theme

Proof of concept custom theme for the CIOOS-SIOOC CKAN instances

ckanext-scheming

Easy, shareable custom CKAN schemas

ckanext-spatial

Geospatial extension for CKAN

hakai-ckan-records-checks

hakai-ckan-records-conversion

Convert CKAN records to other standard formats.

hakai-metadata-conversion

This project provides a tool to generate various metadata formats and standards from the Hakai(CIOOS) metadata catalog form yaml format. It aims to facilitate the sharing and citation of datasets by converting metadata records into widely recognized standards.

hakai-metadata-entry-form

CIOOS Metadata entry form

hakai-metadata-entry-form-files

jsp-gsi

Genetic stock identification data from the Hakai Institute Juvenile Salmon Program

metadata-review

metadata-xml

Documentation and code for creating and working with CIOOS metadata XML files

nearshore-RI_barnaclePoints

This is a repository for data from barnacle point count surveys conducted by the Hakai Institute on Calvert Island

nearshore-RI_FucusPoints

This is a repository for data from Fucus point count surveys conducted by the Hakai Institute on Calvert Island

nearshore-RI_motileInvertebrates

This is a repository for data from motile invertebrate surveys conducted by the Hakai Institute on Calvert Island

process_ocean_timeseries

This set of tools is used to process diverse oceanograhic instrument data.