Heather M. Jeffery's repositories
Thesis_supplementary
Scripts and external datasets used in my thesis for the University of Oxford. The title of my thesis is 'Genomic single molecule analysis of chromatin structure around DNA replication origins in Saccharomyces cerevisiae".
Advent_of_code_2020
My solutions in python to the advent of code challenges set in 2020.
artic-ncov2019
ARTIC nanopore protocol for nCoV2019 novel coronavirus
Language:PythonCC-BY-4.0000
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fieldbioinformatics
The ARTIC field bioinformatics pipeline
Language:PythonMIT000
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IBD_research
New analysis and visualisations of published datasets related to inflammatory bowel disease.
strspy
STRspy: a novel alignment and quantification-based state-of-the-art method, short tandem repeat (STR) detection calling tool designed specifically for long-read sequencing reads such as from Oxford nanopore technology (ONT) and PacBio.
Language:ShellMIT000