HHHIT's repositories

DL-based-Tumor-Classification

Deep Learning Based Tumor Type Classification Using Gene Expression Data

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2012-01_Stanford_CS228

Probabilistic Graphical Models

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Awesome-Neuron-Segmentation-in-EM-Images

A curated list of resources for 3D segmentation of neurites in EM images

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cellclusterSplittingApp

A tool used for splitting the clusters in cell segmentation

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CellProfiler

An open-source application for biological image analysis

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DeepEM

Deep Learning for EM Connectomics

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EM-net

This repository is official implementation of "EM-net: Deep learning for electron microscopy image segmentation" on Google Colab.

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ffn

Flood-Filling Networks for instance segmentation in 3d volumes.

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keras

Deep Learning for humans

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medical-imaging-datasets

A list of Medical imaging datasets.

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opengm

A C++ Library for Discrete Graphical Models

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PRMLT

Matlab code of machine learning algorithms in book PRML

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pysim

A python package to simulate structural variation

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RORPO

Ranking Operator Response of Path Openings

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SynQuant

A Fiji plugin that automatically quantify synapses from multi-channel fluorescence microscopy images.

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UNI-EM-proofreading

A unified environment for DNN-based automated segmentation of neuronal EM images

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waterz

Simple watershed and agglomeration library for affinity graphs.

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