HFooladi

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llama3-from-scratch

llama3 implementation one matrix multiplication at a time

Language:Jupyter NotebookMIT1132100

llm.c

LLM training in simple, raw C/CUDA

Language:CudaMIT2214700

build-your-own-x

Master programming by recreating your favorite technologies from scratch.

HFooladi.github.io

A personal blog where I write my ideas and thoughts.

Language:JavaScriptMIT200

DrugOOD

OOD Dataset Curator and Benchmark for AI-aided Drug Discovery

Language:PythonNOASSERTION14700

Prompt-Engineering-Guide

🐙 Guides, papers, lecture, notebooks and resources for prompt engineering

Language:MDXMIT4641300

DIG

A library for graph deep learning research

Language:PythonGPL-3.0181700

Ax

Adaptive Experimentation Platform

Language:PythonMIT231100

rdkit

The official sources for the RDKit library

Language:HTMLBSD-3-Clause253000

torch-dftd

pytorch implementation of dftd2 & dftd3

Language:PythonMIT5700

lightdock

Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm

Language:PythonGPL-3.029700

nequip

NequIP is a code for building E(3)-equivariant interatomic potentials

Language:PythonMIT56600

cgdms

Differentiable molecular simulation of proteins with a coarse-grained potential

Language:PythonMIT5200

ColabFold

Making Protein folding accessible to all!

Language:Jupyter NotebookMIT181000

jaxopt

Hardware accelerated, batchable and differentiable optimizers in JAX.

Language:PythonApache-2.090600

jax-md

Differentiable, Hardware Accelerated, Molecular Dynamics

Language:Jupyter NotebookApache-2.0113200

hydra

Hydra is a framework for elegantly configuring complex applications

Language:PythonMIT843400

equivariant-MLP

A library for programmatically generating equivariant layers through constraint solving

Language:Jupyter NotebookMIT25000

pytorch-lightning

Pretrain, finetune and deploy AI models on multiple GPUs, TPUs with zero code changes.

Language:PythonApache-2.02755400

pytorch_geometric

Graph Neural Network Library for PyTorch

Language:PythonMIT2064800

rich

Rich is a Python library for rich text and beautiful formatting in the terminal.

Language:PythonMIT4831200

esm

Evolutionary Scale Modeling (esm): Pretrained language models for proteins

Language:PythonMIT301500

checklist

Beyond Accuracy: Behavioral Testing of NLP models with CheckList

Language:Jupyter NotebookMIT199100

awesome-mlops

A curated list of references for MLOps

system-design-primer

Learn how to design large-scale systems. Prep for the system design interview. Includes Anki flashcards.

Language:PythonNOASSERTION26479500

DeepPurpose

A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics)

Language:Jupyter NotebookBSD-3-Clause94000

reinforcement-learning-an-introduction

Python Implementation of Reinforcement Learning: An Introduction

Language:PythonMIT1335500

uncertainty-toolbox

Uncertainty Toolbox: a Python toolbox for predictive uncertainty quantification, calibration, metrics, and visualization

Language:PythonMIT177000

neural-processes

This repository contains notebook implementations of the following Neural Process variants: Conditional Neural Processes (CNPs), Neural Processes (NPs), Attentive Neural Processes (ANPs).

Language:Jupyter NotebookApache-2.096900

deepchem

Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology

Language:PythonMIT530200