HBP Medical Informatics Platform

portal-frontend

Frontend for the MIP portal

DataCatalogue

mip-deployment

Deploy the Medical Informatics Platform

mip-docs

Documentation for Medical Informatics Platform

gateway

Gateway between the portal frontend and an engine (exareme, datashield, etc..)

mip-dmp

Python tool with Graphical User Interface to map datasets to a specific Common Data Elements (CDEs) metadata schema of a federation of the Medical Informatics Platform (MIP).

mip_schema

Open-source Python package to manipulate Common Data Elements Metadata Schema for the Medical Informatics Platform (MIP).

portal-backend

Backend for the MIP portal

pytest-mip

Tool to test the up-and-running MIP federations.

exareme

EXAREME

mip.ebrains.eu

Medical Informatics Platform (MIP) website

.github

✨Special ✨ repository that is use to add and display a README.md to the HBPMedical organization

cscs-openstack-config

cscs-openstack-docker

cscs-openstack-migrate

DataQualityControlTool

Data Profiler Tool for the Human Brain Project MIP Local Layer.

docker-pgtap

Postgres pgTap test runner in docker

docker-swarm-kernel-fix

Quick and dirty fix for the Docker Swarm issue that we had in 2022, passed a certain Linux kernel version

ehr-datafactory-template

ehr-mapping-design-template

bash scripts for testing a hospital's mapping task on a local machine

Enabling_Services

Enabling Services for the MIP front end.

heatmaply

Interactive Heat Maps for R Using plotly

LORIS-for-MIP

Setup of LORIS tailored for the Medical Informatics Platform

mip-endpoint-check

Check the checkpoint

MIPMap

rsshfs

Reverse of sshfs

Rtsne

R wrapper for Van der Maaten's Barnes-Hut implementation of t-Distributed Stochastic Neighbor Embedding

vagrant-installer

vagrant-mip-deployment

vagrant-openstack-provider

Use Vagrant to manage OpenStack Cloud instances.