Helena Herrmann's repositories
FluxSamplingComparison
Paper with B.C.D & L.V. & G.N.J & J.-M.S.
NetworkEpidemics
Using network science to propose strategies for effectively dealing with pandemics: The COVID-19 example
Fitting-LRCs-R
Fitting Light Response Curves (LRCs) to Photosynthetis Data in R
FMEA_KineticModel
Failure Mode & Effect Analysis (FMEA) & Modelling Diurnal Fumarate and Malate Accumulation Across Temperatures
Hct116_DrugRes
Investigating aquired metallodrug resistance in colorectal cancer using a genome-scale metabolic model of HCT116
CBM_Matlab
Introduction to Constaint-based Modelling in Matlab
ConvHull
Convex hull method for vertex enumeration of multi-dimensional production envelopes in metabolic models.
FluxSamplingCol0Fum2
Flux sampling on the Arnold & Nikoloski 2014 model after imposing condition-dependent constraints obtained from proteomics, metabolite and gas exchange data [in submission]
PythonTeaching
Basic Python Lesson for Constraint-based Metabolic Modelling