Mateus Harrington's starred repositories

acronyms

Adds support for Acronyms, and List of Acronyms, to Quarto documents.

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awesome-rices

A curated list of awesome unix user rices!

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quarto-nvim-kickstarter

Neovim configuration to show my plugins in action.

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dots-hyprland

Modern, feature-rich and accessible desktop configuration.

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NixOS-Flake

My NixOS Flake + dotfiles

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nixos-config

General purpose Nix configuration for macOS / NixOS with starter templates, step-by-step guides, and more ✨

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reanalysis_Mathys_2019

A re-analysis of the [Single-cell transcriptomic analysis of Alzheimer’s disease](https://www.nature.com/articles/s41586-019-1195-2) using a standardised data processing and pseudobulk differential expression approach

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scFlow

Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.

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obsidian-execute-code

Obsidian Plugin to execute code in a note.

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do4ds

A book on DevOps for Data Scientists with CRC Press.

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tokyorslide

TokyoR用スライド

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reproducibility-with-quarto

Demo reproducible quarto workflow with GitHub Actions

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doomemacs

An Emacs framework for the stubborn martian hacker

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rworkflows

Continuous integration for R packages. 🔀 Automates testing ✅, documentation website building 📦, & containerised deployment 🐳.

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cc-licenses

Creative Commons Licenses for Github

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course-starter-r

👩‍🏫🇷 Starter repo for building interactive R courses

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todor

TODOr - RStudio add-in for finding TODO, FIXME, CHANGED etc. comments in your code.

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scFlow

Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.

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quarto-cli

Open-source scientific and technical publishing system built on Pandoc.

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bibtex-tidy

Cleaner and Formatter for BibTeX files

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ess-view-data

View data support for ESS

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dotemacs

My emacs configuration.

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projects

Various research projects

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plausible-hugo

Dead simple integration between plausible.io and gohugo.io

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poly-R

Polymodes for the R language

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Challenge-1-London-Team-B-Genome-Wide-Association-Lovers-

We suggest a novel way of defining NCD as a continuous phenotype, and we employ a mixed linear model to account for pronounced population stratification in the South Asian sample, which is more diverse than European samples, for example.

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online-learning-resources

Online resources for self-study in software-related topics and skills

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xaringan

Presentation Ninja 幻灯忍者 · 写轮眼

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thesisdown

An updated R Markdown thesis template using the bookdown package

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