Guan Lab

Guan Lab's repositories

DeepSleep

Language:PythonNOASSERTION40 5 4

Leopard

Language:Python16 5 12

FastClone_GuanLab

Language:PythonGPL-3.015 6 13

DrugComb-cross-study-prediction

machine learning models for cross-study combination response prediction

Language:Jupyter Notebook6 3 1

timesias

Predict outcomes from time-series data

Language:HTMLMIT6 40

PDDB

Winning algorithm for 2017 PDDB DREAM Challenge

Language:Python5 4 2

sepsis

Top-performing algorithm for DII National Data Science Challenge

Language:HTMLMIT5 40

GuanRank_All

Application examples of GuanRank in deep learning (images), lightGBM and recurrent neural networks (time-series)

Language:Roff4 50

Microarray

Language:Python400

Ocelot

Language:PythonMIT4 30

Sleep-Stage-Auto-annotation

Language:PythonMIT4 40

TAIJI

TAIJI: Approaching Experimental Replicates-Level Accuracy for Drug Synergy Prediction --Yuanfang's DREAM Drug Synergy Winning Algorithm

Language:Perl3 40

Sequence_Analysis_for_TF-co-binding

Language:Perl2 30

BEAT-PD

BEAT-PD winning algorithm

Language:Python1 40

CausalBench2023_Challenge

The winning solution of the CausalBench 2023 Challenge

Language:PythonMIT1 20

ENCODE_imputation

Language:Python1 40

Image_based_doublet_detection

Language:Python1 10

PDTap

Language:Python1 40

DDR-drug-synergy-prediction-ShinyApp

Shiny app for DDR drug synergy prediction based on molecular context

Language:HTMLNOASSERTION050

Cell-Linage-Reconstruction

2019 DREAM Lineage Reconstruction Challenge

Language:Python030

ciclops

Pipeline for building clinical outcome prediction models on training dataset and transfer learning on validation datasets.

Language:PythonMIT020

CODA_TB_DREAM_Challenge

Code to CODA TB DREAM Challenge

Language:Python020

COVID-19

Language:Python000

DDR_combination_analysis

Statistical analysis of DDR combination response

Language:Jupyter NotebookMIT020

For_new_lab_members

Startup settings for new lab members

040

ImageDoubler

Language:Jupyter NotebookMIT000

Mandora

Language:Python020

Predict-Malaria-ART-Resistance

Winning algorithm in 2019 Malaria DREAM Challenge Subchallenge 2

Language:Python040

Sensorium2022_Challenge

The winning solution for the SENSORIUM 2022 Challenge

Language:Jupyter Notebook000

single_cell_imputation

Language:Python040