Grotjahn Lab's repositories
surface_morphometrics
Morphometrics for Membrane Surfaces Segmented from Cryo-ET or other volumetric imaging.
GrotjahnLab.github.io
Grotjahn Lab Website
warp_lamella_adapters
A short optimized pipeline to get lamella tomography (with pretilt and with some tilts obscured or mistracked) to work well with Warp
filament_morphometrics
Morphometrics, Particle Picking, and Guided STA on Cytoskeletal Filaments from CryoET
BSD-3-Clause000
pycurv
Reliable estimation of membrane curvature for cryo-electron tomography
Language:PythonLGPL-3.0000
measure_models
Making measurements between subcellular models from cryoET
teamtomo.github.io
A collaborative knowledge sharing platform for the cryo-ET community
Language:MATLABBSD-3-Clause000
guided_tomo_align
Scripts for using references aligned to particles in 3D subvolumes in Chimera sessions for alignment
Language:PythonMIT000
polyqIB
Software developed to analyze how polyQ inclusion bodies interact with ER membranes in situ
000