Germán Fernández's repositories
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bioformats_batchreader
bioformats_batchreader for Neuroepigenetic lab, based on Patrice Mascalchi code.
cellpose
a generalist algorithm for cellular segmentation with human-in-the-loop capabilities
Language:Jupyter NotebookBSD-3-Clause000
DeepLabCut
Official implementation of DeepLabCut: Markerless pose estimation of user-defined features with deep learning for all animals incl. humans
Language:PythonLGPL-3.0000
Language:Jupyter NotebookMIT000
IntanAccelerometerCalibration
Procedure for accelerometer calibration.
simba
SimBA (Simple Behavioral Analysis), a pipeline and GUI for developing supervised behavioral classifiers
Language:PythonMIT000
Language:RMIT000