GerkeLab / epiTAD

Visualize Hi-C data alongside annotation relevant to genetic epidemiology studies

Home Page:https://gerkelab.com/project/epiTAD

Geek Repo:Geek Repo

Github PK Tool:Github PK Tool

Assorted cleanup

tgerke opened this issue · comments

  • Deselect "Hits" for RegulomeDB, it's way messy to have as a default
  • Instead of "take me to" for GTEx, ClinVar, and Genome Browser, could the link read as a description of where/why they're going to each of these sites? Something like "GTEx eQTL browser for selected region" etc
  • I think the Figure should show by default (i.e. have precedence over the Links tab), since the figure is the most interesting part of the app!
  • @gadenbuie are there any R hipster color schemes we should be using in the figure? Sometimes I can't quite get it to look a way I'd like.

R hipster color schemes

I'm a big fan of viridis no matter how many times I see it. Also because it was designed for legibility across media and accesibility for color blind users. I can add them as options.

Figure should show by default

Would it make sense to move that panel up on the screen? And if so, what would the new arrangement of panels look like?