Gerke Lab

betterposter

👩‍🔬👨‍🔬 Another R Markdown Better Scientific Poster

shinyDAG

a Shiny app to create/visualize/analyze causal diagrams (DAGs)

mediator

Causal mediation analysis in R

TCGAhrd

Homologous recombination deficiency in TCGA PanCancer Atlas

grkmisc

A package of miscellaneously helpful functions.

TCGAclinical

Clinical data for the TCGA PanCancer Atlas

TCGAancestry

Admixture estimates for the TCGA panCancer cohort

epiTAD

Visualize Hi-C data alongside annotation relevant to genetic epidemiology studies

fcds

Process data from the Florida Cancer Data System

prostatePrognosticPanels

awesome-cancer-variant-databases

A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants.

curatedProstateData

hexLogoGerke

Hex logo/sticker for Gerke Lab

moffitdocs

R Markdown Templates for Moffitt Cancer Center

prostate-risk-classification

comparing risk stratification tools for prostate cancer

SEERreadr

Read SEER Fixed Width Data Files

core-r-course

fcds-poster

🖼 fcds poster

loglin

Easy R Code for Convergent Log-Linear Models

cmediation

Tools for Counterfactual Meditation Analysis

different

Compare Differences in Data Frames

fcdsExplorer

gerkelab-com

Website source for gerkelab.com

gformula

g-formula

GSE46691

Download and import GSE46691 into R with updated HUGO gene names

PAM50

phenoptrExtra

Extra functions to extend phenoptr

ThyroidRAS

Data and code for examining gene expression differences in RAS thyroid tumors

tricks

Perform statistical tricks

xCellCalls