GergelyTuri

optoImaging

Description of in vivo optogenetic activation during two-photon imaging (Turi et al. 2019 Neuron)

context-project

analysis code for context project

els_project

HallPassVR

virtual reality environment for mice

nsf-reu

NSF REUsite at NYSPI

3Dscript

behaviorMate

static version of the behavior recording software used with the 2p rig.

chronicSleepRecordings

fiberphotometry

basic routines for reading, visualizing and analyzing fiberphotometry recordings

GergelyTuri.github.io

RdataAnalysis

data analysis in R

sleep

analysis code for sleep data

tFC-rig

trace fear conditioning rig

behaviorProtocols

programs for Medassociates behavior chambers

CellReg

Registration of cells across sessions.

contextBox

Behavior box for mice conductung contextual discrimination task

DeepLabCut

Markerless pose estimation of user-defined features with deep learning for all animals, including humans

deepof

DeepLabCut based data analysis package including pose estimation and representation learning mediated behavior recognition

gergoGithubCode

Neurite_FISH_Quant

Python code for quantification of FISH puncta in neurites

nyspi-reu

test website for nyspi-reu site

pupillometry-rig

pupillometry rig

rastermap

a visualization method for neural data

sleep-box

supplyManagement

treadmill

partlist and assambly instruction for DIY treadmill for rodent imaging

turi-lab

VAME

Variational Animal Motion Embedding - A tool for time series embedding and clustering

VRmouse

webscraping

covid19 related webscraping project