The current version of the pipleine uses ichorCNA:v0.5.0 and docker image gavinhalab/ichorcna:1.0.0 found on DockerHub
To run the WDL pipeline, please follow the instructions here
Please find the ichorCNA source code here
Has Dockerfile and WDL pipeline for ichorCNA
The current version of the pipleine uses ichorCNA:v0.5.0 and docker image gavinhalab/ichorcna:1.0.0 found on DockerHub
To run the WDL pipeline, please follow the instructions here
Please find the ichorCNA source code here
Has Dockerfile and WDL pipeline for ichorCNA
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